Positions and jobs at the KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Durban, South Africa



SPOTLIGHT

KRISP Training


KRISP News


KRISP News

PREVIOUS SPOTLIGHTS


KRISP NEWS

2017-11-04
KRISP Jobs

Five (5) KRISP positions open in Durban! Grants Manager, Office Admin, Molecular Technologist, DNA Data & Laboraroty Quality administrators.

KRISP wants to challenge the status quo and create a scientific environment in (South) Africa that drives innovations in global health, reverses the brain drain and benefits the economy. KRISP staff are based in a state of the art building in Durban and have access to fast advancing technologies such as genomics, epigenetics, bioinformatics and epidemiology.


2017-10-23
KRISP Talks

Improving the estimation of temporal trends in HIV incidence by calibrating agent-based simulation models to multiple data sources

KRISP Talks by Dr. Wim Delma, SACEMA (Stellenbosch), 23 October 2017 (11:00am - 12:00), K-RITH building, Nelson R Mandela School of Medicine, UKZN, Durban, South Africa. All welcome!


2017-10-04
KRISP Training

X-meeting - 13th International Conference of the AB3C, Sao Pedro, Brazil, Oct 4-6, 2017

Bioinformatics is now a strategic area for Brazil and all Latin America and, therefore, it is also strategic to the development of Science, Technology and Economy. The X-Meeting is a Brazilian event with international reach which has an average of 400 participants.


2017-09-20
KRISP Talks

Paediatric HIV Infection: Elite Control, Remission and Cure

KRISP Talks by Prof. Philip Goulder, Oxford University, 20 September 2017 (14:00 - 15:00), K-RITH building, Nelson R Mandela School of Medicine, UKZN, Durban, South Africa. All welcome!


2017-09-06
KRISP Training

11th Annual Workshop on Advanced Clinical Care - AIDS (AWACC), Durban, South Africa, 6-7 Sep 2017

The workshop is targeted at 400 clinicians, clinical virologists and nurses working in the public sector who are currently involved in the treatment of patients with HIV and TB in KwaZulu-Natal, South Africa.


2017-08-27
KRISP Training

22nd International Bioinformatics Workshop on Virus Evolution and Molecular Epidemiology (VEME), Lisbon, Portugal

The workshop provides both theoretical and practical training in phylogenetic inference and evolutionary hypothesis testing. It is recognized as one of the best international virus bioinformatics courses. It covers sequence analysis, phylogenetics, phylodynamics methods and large scale methods for next-generation sequencing (NGS) analytics


2017-08-23
KRISP Talks

A multi-centre analysis of internal migration and AIDS/TB and NCD-related mortality in Kenya and South Africa

KRISP Talks by Dr Carren Ginsburg, SAMRC/Wits Rural Public Health & Health Transitions Research Unit (Agincourt), 23 August 2017 (11am - midday), K-RITH building, Nelson R Mandela School of Medicine, UKZN, Durban, South Africa. All welcome!


MORE NEWS


KRISP PAPERS

Impact of point-of-care Xpert MTB/RIF on tuberculosis treatment initiation: a cluster randomised trial.
Lessells RJ, Cooke GS, McGrath N, Nicol MP, Newell ML, Godfrey-Faussett P, Am J Respir Crit Care Med (2017), :doi: 10.1164/rccm.201702-0278OC.

Hyperbilirubinemia in atazanavir-treated human immunodeficiency virus-infected patients: the impact of the UGT1A1*28 allele.
Naidoo A, Naidoo K, Ramsuran V, Reddy M, Padayatchi N, Pharmacogenomics and Personalized Medicine (2017), :doi: 10.2147/PGPM.S146787.

Rates of virological suppression and drug resistance in adult HIV-1-positive patients attending primary healthcare facilities in KwaZulu-Natal, South Africa.
Hunt GM, Dokubo EK, Takuva S, de Oliveira T, Ledwaba J, Dube N, Moodley P, Sabatier J, Deyde V, Morris L, Raizes E, Journal of Antimicrobial Chemotherapy (2017), :https://doi.org/10.1093/jac/dkx252.

Automated profiling of the human virome from raw metagenomic data.
Moosa Y, Vilsker M, Vanden Eyden E, Fonseca V, Nooij S, Deforche K, de Oliveira T, Virus Evolution (2017), : doi: 10.1093/ve/vew036.033.

Persistent circulation of highly divergent HIV-1M lineages in the Congo Basin Region.
Tongo M, Dorfman JR, de Oliveira T, Martin DP, Virus Evolution (2017), :doi: 10.1093/ve/vew036.039.

MORE PUBLICATIONS


KRISP VIDEOS

Krisp - a next generation DNA sequencing research centre opens in Durban, South Africa - eTV news

By: Tulio de Oliveira, Veron Ramsuran, Nicolette Crozier, Zandile Sibisi, Marcel Tongo, Benjamin Chimukangara, Thabiso Dlamini


 

 Krisp - a next generation DNA sequencing research centre opens in Durban, South Africa - eTV news




 

 Transmission networks and risk of HIV infection in KwaZulu-Natal, South Africa: a community-wide phylogenetic study - Keynote presentation at AIDS 2016.




 

 Completion of a world-class genomics lab at KRISP/UKZN, Durban, South Africa - Part III




More video


KRISP TEAM

Benjamin Chimukangara

ALL WORK >>

Nicolette Crozier

ALL WORK >>

Prof. Tulio de Oliveira

ALL WORK >>

Dr. Jennifer Giandhari

ALL WORK >>

Dr. Tiago Graf

ALL WORK >>

Dr. Richard Lessells

ALL WORK >>


Dr. Yumna Moosa

ALL WORK >>

Farirai Mutenherwa

ALL WORK >>

Dr. Veron Ramsuran

ALL WORK >>

Dr. Andrew Tomita

ALL WORK >>

Dr. Alain Vandormael

ALL WORK >>

Dr. Eduan Wilkinson

ALL WORK >>

CURRENT AND PREVIOUS MEMBERS



KRISP BLOGS



Yumna Moosa

Bioinformaticians are pioneering the future of science


Nicolette Crozier, Benjamin Chimukangara, Veron Ramsuran

Meeting of the Swiss, Swedes and South Africans minds


Megan Druce

Megan Druce: from Cum Laude MSc to a Scholarship for a PhD in Germany...



KRISP TOOLS

2016-08-21
Version: 3


REGA HIV Subtyping Tool V3 - South African mirror

This tool is designed to use phylogenetic methods in order to identify the HIV-1 subtype of a specific sequence. The sequence is analysed for recombination using bootscanning methods. The version 3 contains new CRFs (CRF01_AE to CRF47_BF).


2016-08-20
Version: 1


Zika Typing Tool

This is the first version of the Zika typing tool, which uses phylogenetic analysis to identify the species and genotype of the virus.


2016-08-20
Version: 1


Arbovirus Typing Tool

This is the first version of our Arbovirus typing tool for Chikungunya, Dengue, Yellow Fever and Zika


2016-08-20
Version: 1


Chikungunya Typing Tool

This is the first version of the Chikungunya typing tool, which uses phylogenetic analysis to identify the species and genotype of the virus.


2016-08-20
Version: 1


Yellow Fever Virus Typing Tool

This is the first version of the Yellow Fever typing tool, which uses phylogenetic analysis to identify the species and genotype of the virus.


2015-11-06
Version: 1


Dengue Virus Typing Tool

This is a beta version of our Dengue Virus Typing tool. For the mean time, this tool should be used for evaluation only. Please send feedback to Tulio de Oliveira.





KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), K-RITH Tower Building, Nelson R Mandela School of Medicine, UKZN

Contact: Prof. Tulio de Oliveira, Tel: +27 31 260 4898, Email: tuliodna@gmail.com & deoliveira@ukzn.ac.za

Page design updated 2015. Many of the pages were previously hosted at bioafrica.net.