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HIV Whole Genomes (Illumina)

Sample type:

Plasma, extracted RNA or purified amplicon.

Turn-around

10 working days

Service details

Next generation sequencing (NGS) allows to sequence the whole viral genome at a greater depth it also allows high-throughput production of data at a fraction of the cost of traditional sequencing methods. Our protocol produces around 150,000 reads for each whole genome (mean depth of > 1,000 reads per nucleotide position). We have generated over 1,200 genotypes as part of the PANGEA_HIV consortium in South Africa.

Category

DNA Sequencing

Sub-category

Illumina (Miseq, NextSeq, HiSeq)

* Contact us for quote

Please note that academic price involves subsidizing the production of data and KRISP members producing (max. two individuals) and/or analyzing data are normally co-authors to manuscripts. The commercial price include all costs and no-authorship or collaborationn is needed. Price can vary due to exchange rates, price last estimated at - 2018-05-21

- Avaliable Equipment



NGS of Amplicons, Microbial Whole Genomes, Exomes, Transcriptomics, 16S RNA, Microbiome, RNA-Seq

KRISP has been created by the coordinated effort of the University of KwaZulu-Natal (UKZN), the Technology Innovation Agency (TIA) and the South African Medical Research Countil (SAMRC).


Location: K-RITH Tower Building
Nelson R Mandela School of Medicine, UKZN
719 Umbilo Road, Durban, South Africa.
Director: Prof. Tulio de Oliveira